Finding the unloaded geometry

Finding the unloaded geometryΒΆ

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2022-06-01 14:15:48,946 [986] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2022-06-01 14:15:49,140 [986] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2022-06-01 14:15:49,147 [986] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-01 14:15:49,148 [986] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2022-06-01 14:15:49,150 [986] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-01 14:15:50,195 [986] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2022-06-01 14:15:50,220 [986] INFO     pulse.unloader: 
Do an intial solve
2022-06-01 14:17:28,850 [986] INFO     pulse.unloader: 
Iteration: 0
2022-06-01 14:17:35,328 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-01 14:17:35,394 [986] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-01 14:17:42,770 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:42,776 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-01 14:17:42,844 [986] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-01 14:17:43,517 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:43,594 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:43,596 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:43,663 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:43,665 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:17:43,729 [986] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2022-06-01 14:19:22,571 [986] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2022-06-01 14:19:22,834 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:22,836 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:22,904 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:22,906 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:22,971 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:22,973 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,036 [986] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2022-06-01 14:19:23,062 [986] INFO     pulse.unloader: 
Residual:	0.01132862342853825
2022-06-01 14:19:23,064 [986] INFO     pulse.unloader: 
Iteration: 1
2022-06-01 14:19:23,345 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,347 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,413 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,415 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,485 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,487 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:23,550 [986] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2022-06-01 14:19:28,858 [986] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2022-06-01 14:19:29,129 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,130 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,198 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,199 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,272 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,274 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,335 [986] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2022-06-01 14:19:29,364 [986] INFO     pulse.unloader: 
Residual:	0.001698010214540318
2022-06-01 14:19:29,365 [986] INFO     pulse.unloader: 
Iteration: 2
2022-06-01 14:19:29,644 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,646 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,714 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,716 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,784 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,786 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:29,852 [986] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2022-06-01 14:19:35,274 [986] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2022-06-01 14:19:35,546 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,549 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,618 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,620 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,689 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,691 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:35,754 [986] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2022-06-01 14:19:35,779 [986] INFO     pulse.unloader: 
Residual:	0.0002592876931296334
2022-06-01 14:19:35,780 [986] INFO     pulse.unloader: 
Iteration: 3
2022-06-01 14:19:36,050 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,052 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,122 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,124 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,189 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,191 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:36,254 [986] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2022-06-01 14:19:41,606 [986] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2022-06-01 14:19:41,873 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:41,875 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:41,943 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:41,945 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,012 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,014 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,077 [986] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2022-06-01 14:19:42,102 [986] INFO     pulse.unloader: 
Residual:	3.931304295929379e-05
2022-06-01 14:19:42,105 [986] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2022-06-01 14:19:42,375 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,376 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,441 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,443 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,514 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-01 14:19:42,516 [986] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()